Blockwise diagnostic for duration misspecification
Source:R/diagnostics_duration.R
diagnostic_duration_blockwise.RdCompare the observed number of switches in a binary long-step feature within contiguous blocks to the predictive distribution under an HMM and an HSMM-like diagnostic alternative.
Usage
diagnostic_duration_blockwise(
data,
null_parameters,
dwell_mean,
dwell_size,
step_threshold,
block_size = 30L,
n_simulations = 1000L,
pseudo_count = 1,
alpha = 0.05,
diagnostic_name = "duration_blockwise",
metadata = list()
)Arguments
- data
Movement data with
step_lengthandturning_angle.- null_parameters
Null HMM parameters.
- dwell_mean, dwell_size
HSMM-like dwell-time parameters for the diagnostic alternative.
- step_threshold
Positive threshold defining long steps.
- block_size
Number of observations per block.
- n_simulations
Number of simulations for the HSMM block feature law.
- pseudo_count
Non-negative pseudo-count for the simulated alternative feature distribution.
- alpha
Monitoring level.
- diagnostic_name
Diagnostic name.
- metadata
Optional metadata list.